/*
 * Copyright 2014-2015 Mikhail Shugay
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package com.antigenomics.migmap.io

import com.antigenomics.migmap.pipeline.Util
import groovy.transform.CompileStatic

@CompileStatic
class FastqWriter implements InputPort<Read> {
    final BufferedWriter writer

    FastqWriter(String fileName) {
        this.writer = Util.getWriter(fileName)
    }

    @Override
    void put(Read read) {
        writer.println(read)
    }

    @Override
    void close() {
        writer.close()
    }
}
